Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1613

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1612: 9980 - Hypothetical Protein, at 717528 to 719368 9980 mRNA_1613: 9981 - K01228 GCS1 mannosyl-oligosaccharide glucosidase, at 719549 to 722839 9981 mRNA_1614: 9982 - KOG2819 Uncharacterized conserved protein, at 722930 to 724798 9982

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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718,812 + 9980 mRNA_1612 0.70 0.3
718,897 + 9980 mRNA_1612 0.74 0.4
719,049 + 9980 mRNA_1612 0.83 -0.0
719,052 - 9980 mRNA_1612 0.83 1.4
719,073 + 9980 mRNA_1612 0.84 -0.2
719,100 + 9980 mRNA_1612 0.85 -0.8
719,203 + 0.4
719,507 + 0.7
719,581 - -0.2
720,237 - 9981 mRNA_1613 0.21 0.3
720,412 + 9981 mRNA_1613 0.26 0.1
720,516 + 9981 mRNA_1613 0.29 0.3
720,530 - 9981 mRNA_1613 0.30 -2.5
720,665 - 9981 mRNA_1613 0.34 -1.5
720,964 + 9981 mRNA_1613 0.43 -2.6
721,296 + 9981 mRNA_1613 0.53 -1.3
721,551 - 9981 mRNA_1613 0.61 -0.4
721,853 - 9981 mRNA_1613 0.70 -0.5
722,132 - 9981 mRNA_1613 0.78 0.1
722,273 - 9981 mRNA_1613 0.83 -0.3
722,605 - -2.2
722,743 + 2.4
722,884 + 0.7
723,005 - -0.8
723,025 + -0.1
723,030 - -0.6
723,033 + -0.7
723,127 + 9982 mRNA_1614 0.11 -0.1
723,176 - 9982 mRNA_1614 0.13 -0.8