Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1543

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1542: 9910 - K01834 PGAM, gpmA 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, at 551474 to 552455 9910 mRNA_1543: 9911 - Hypothetical Protein, at 552970 to 553858 9911

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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552,688 + 0.1
552,716 + 0.1
552,814 - 1.0
552,833 - 1.1
552,834 - 1.0
552,835 + 0.5
552,869 - -0.0
553,300 + 9911 mRNA_1543 0.37 0.1
553,547 + 9911 mRNA_1543 0.65 0.6
553,564 + 9911 mRNA_1543 0.67 -0.5
553,728 + 9911 mRNA_1543 0.85 -0.2
553,856 - -0.1
553,865 + 0.7
553,867 - -0.1
553,870 - -2.5
553,870 + -0.3
553,875 + -0.5
554,002 - -0.5
554,007 - 0.2
554,007 - 1.2
554,014 + 0.5
554,016 - -0.2
554,017 - 1.8
554,020 - 1.3
554,021 - -0.5
554,038 - -0.2
554,039 + -0.3
554,042 + 0.0
554,047 + 0.5
554,183 - -0.9
554,189 - -0.1
554,625 - -0.1
554,631 + 0.7
554,648 + 0.3
554,774 - 0.9