Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1466

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1464: 9832 - BLAST conidiation protein Con-6, putative [Aspergillus ..., at 351662 to 352112 9832 mRNA_1465: 9833 - Hypothetical Protein, at 352394 to 352564 9833 mRNA_1466: 9834 - BLAST putative catalytic domain thiamin pyrophosphokinase [..., at 352655 to 354087 9834 mRNA_1467: 9835 - HMMPfam-Mannosyl oligosaccharide glucosidase-PF03200,SUPERFAMILY--SSF48208, at 354447 to 358959 9835

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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351,688 - 0.8
351,907 + 9832 mRNA_1464 0.54 0.8
352,467 + 9833 mRNA_1465 0.43 1.2
352,633 + -1.6
352,659 + -0.0
352,660 - -1.9
352,671 - -1.1
352,679 + 0.5
352,814 + 9834 mRNA_1466 0.11 -0.2
352,942 - 9834 mRNA_1466 0.20 0.9
353,092 - 9834 mRNA_1466 0.30 0.9
353,093 + 9834 mRNA_1466 0.31 -0.5
353,973 - 0.1
353,985 + -0.2
354,103 - 0.8
354,124 - 0.6
354,184 + 0.8
354,210 + -0.4
354,220 - 0.2
354,232 - 0.1
354,241 - 0.9
354,252 + 1.1
354,297 - -0.8
354,339 - 1.4
354,341 + -0.3
354,360 + -0.1
354,365 + 0.2
354,382 + 0.2
354,411 + -0.1
354,424 - 0.5
354,433 - -0.1
354,514 + 1.1
354,540 + 0.0
354,543 + -0.7
354,552 + 0.1
354,592 + 0.5
354,689 - -0.1
354,713 - -0.3
354,720 - -0.3
354,740 + -2.0
354,814 + 0.9
354,859 - -0.5
354,864 + 0.4