Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1457

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1456: 9824 - Hypothetical Protein, at 334621 to 335519 9824 mRNA_1457: 9825 - K00549 metE 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, at 336305 to 339274 9825 mRNA_1458: 9826 - K17775 MDM34, MMM2 mitochondrial distribution and morphology protein 34, at 339999 to 342727 9826

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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335,522 + -0.5
335,672 - -0.8
335,776 + -0.7
335,805 - -0.6
335,830 - -0.2
335,965 - 0.8
336,096 + -0.3
336,098 + 0.4
336,155 - -0.2
336,158 + 0.0
336,217 - -0.3
336,261 - 0.4
336,731 - 9825 mRNA_1457 0.14 -0.4
336,808 + 9825 mRNA_1457 0.17 -0.6
336,980 - 9825 mRNA_1457 0.23 -0.9
337,143 - 9825 mRNA_1457 0.28 -0.3
337,430 + 9825 mRNA_1457 0.38 -0.1
337,721 - 9825 mRNA_1457 0.48 -0.2
337,742 + 9825 mRNA_1457 0.48 0.8
339,024 + -0.3
339,287 + -0.6
339,288 + -0.8
339,292 - 1.0
339,307 - 0.2
339,425 - -0.1
339,444 - -0.5
339,466 - -1.8
339,471 - 1.1
339,471 - 0.3
339,471 - 0.4
339,473 - -1.9
339,473 - -0.3
339,474 + -0.1
339,477 + -0.2
339,481 + 0.8
339,483 + -0.4
339,485 + 0.1
339,488 - 1.1
339,490 + -0.6
339,494 - -0.5
339,495 + -0.8
339,496 - -0.8
339,594 - -1.0
339,623 + 0.1
339,670 - 0.1
339,672 - -0.3
339,679 + 0.9
339,681 + -0.6
339,777 - -2.0
339,788 - -2.2
339,795 + -0.5
339,808 - 1.4
339,811 - 0.6
339,815 - 1.0
339,822 + -1.0
339,979 + -0.8