Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1348

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1348: 9716 - SUPERFAMILY--SSF52047, at 54968 to 55797 9716 mRNA_1349: 9717 - K12852 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component, at 56192 to 59943 9717

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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54,018 + 1.1
54,024 + -0.1
54,037 - 0.9
54,050 + -0.5
54,059 + -1.3
54,062 - -0.2
54,071 + -0.4
54,192 + -0.3
54,210 + 1.2
54,473 + -0.5
54,480 + 1.2
54,643 - -0.6
54,741 + -0.3
55,054 + 9716 mRNA_1348 0.10 0.0
55,186 - 9716 mRNA_1348 0.26 -0.4
55,326 + 9716 mRNA_1348 0.43 -0.3
55,347 - 9716 mRNA_1348 0.46 1.1
55,443 - 9716 mRNA_1348 0.57 0.3
55,483 + 9716 mRNA_1348 0.62 -0.0
55,624 + 9716 mRNA_1348 0.79 1.3
55,742 - 0.6
55,768 - -1.0
55,788 + 0.3
55,905 + 0.3
55,919 - 0.5
55,933 + -0.9
55,945 - -1.1
56,014 + -1.0
56,071 + 0.4
56,083 - 0.2
56,126 - -2.1