Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1263

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1262: 9630 - KOG4781 Uncharacterized conserved protein, at 780962 to 782100 9630 mRNA_1263: 9631 - K06130 LYPLA2 lysophospholipase II, at 782267 to 783226 9631 mRNA_1264: 9632 - HMMPfam-Mitochondrial ribosomal protein subunit L20-PF12824, at 783698 to 784459 9632

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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781,567 - 9630 mRNA_1262 0.53 0.9
781,776 + 9630 mRNA_1262 0.71 -0.1
781,992 - -1.1
782,011 + 1.1
782,019 + -1.2
782,057 + -0.4
782,108 + 0.1
782,129 - -0.4
782,141 - -0.2
782,148 - -0.0
782,152 - -1.6
782,156 + 0.8
782,156 - -0.3
782,158 + -1.8
782,158 + -0.2
782,170 + -1.0
782,181 - 0.1
782,227 + 1.0
782,265 - -0.5
782,344 - -0.4
782,354 - -0.5
782,909 + 9631 mRNA_1263 0.67 -1.6
783,049 - 9631 mRNA_1263 0.81 0.9
783,085 - 9631 mRNA_1263 0.85 -1.3
783,098 + 9631 mRNA_1263 0.87 0.5
783,217 - 0.0
783,363 + -0.0
783,489 - -0.9
783,615 - 0.1
783,625 - 0.4
783,709 - -0.3