Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1164

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1163: 9531 - KOG1378 Purple acid phosphatase, at 549366 to 551873 9531 mRNA_1164: 9532 - Hypothetical Protein, at 552710 to 552960 9532 mRNA_1165: 9533 - HMMPfam-Protein of unknown function (DUF1445)-PF07286,PIRSF--PIRSF029755,SUPERFAMILY--SSF160920, at 553391 to 554372 9533

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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551,802 - -0.1
551,900 - -0.9
552,323 + -0.6
552,338 - 0.5
552,354 + -1.0
552,650 + -1.6
552,697 - -0.6
552,701 + 0.5
552,761 + 9532 mRNA_1164 0.20 0.6
552,777 - 9532 mRNA_1164 0.27 -0.2
552,788 - 9532 mRNA_1164 0.31 1.3
552,789 - 9532 mRNA_1164 0.31 0.1
552,824 + 9532 mRNA_1164 0.45 0.4
552,848 - 9532 mRNA_1164 0.55 0.1
552,853 + 9532 mRNA_1164 0.57 -0.2
553,116 - -1.2
553,137 - -1.3
553,157 + -2.0
553,161 + 1.5
553,270 + -0.1
553,272 - 0.4
553,435 - 1.6
553,528 - 9533 mRNA_1165 0.14 -0.7
553,595 - 9533 mRNA_1165 0.21 0.3
553,726 + 9533 mRNA_1165 0.34 -1.2
553,732 - 9533 mRNA_1165 0.35 -0.6