Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1153

Experiments: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1152: 9520 - KOG0069 Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily), at 523077 to 524441 9520 mRNA_1153: 9521 - K13513 LCLAT1, AGPAT8 lysocardiolipin and lysophospholipid acyltransferase, at 524550 to 526104 9521 mRNA_1154: 9522 - Hypothetical Protein, at 526597 to 527643 9522

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
523,628 - 9520 mRNA_1152 0.40 0.3
523,844 + 9520 mRNA_1152 0.56 -1.2
523,894 - 9520 mRNA_1152 0.60 0.1
524,045 - 9520 mRNA_1152 0.71 -0.5
524,148 - 9520 mRNA_1152 0.78 -0.9
524,178 - 9520 mRNA_1152 0.81 -0.7
524,639 - -0.4
524,833 + 9521 mRNA_1153 0.18 -0.4
525,743 + 9521 mRNA_1153 0.77 0.1
525,769 + 9521 mRNA_1153 0.78 0.2
526,021 - 1.4
526,177 + 0.1
526,446 + -0.2
526,479 - 0.6
526,481 + -1.5
526,508 + -2.6
526,509 - -2.3
526,605 - -0.8
526,761 + 9522 mRNA_1154 0.16 -1.0
526,771 + 9522 mRNA_1154 0.17 1.5
526,941 - 9522 mRNA_1154 0.33 -0.1
526,952 + 9522 mRNA_1154 0.34 -1.7
526,954 - 9522 mRNA_1154 0.34 -2.1