Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1038

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1037: 9405 - K12160 SUMO, SMT3 small ubiquitin-related modifier, at 254364 to 255172 9405 mRNA_1038: 9406 - HMMPfam-Protein of unknown function (DUF2034)-PF10356, at 255756 to 256586 9406 mRNA_1039: 9407 - K18723 GLE1 nucleoporin GLE1, at 256702 to 258919 9407

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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254,930 + 9405 mRNA_1037 0.70 -0.4
255,185 - -0.1
255,344 + 0.7
255,885 - 9406 mRNA_1038 0.16 -0.3
256,353 - 9406 mRNA_1038 0.72 0.3
256,457 + 9406 mRNA_1038 0.84 1.5
256,460 - 9406 mRNA_1038 0.85 0.9
256,507 - 0.8
256,638 - -0.1
256,644 - 0.5
256,659 + -0.1
256,661 + -0.0
256,661 - -1.5