Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_965

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_964: 9332 - Hypothetical Protein, at 86721 to 89416 9332 mRNA_965: 9333 - Hypothetical Protein, at 90078 to 91448 9333 mRNA_966: 9334 - BLAST probable GUS1-Glutamyl-tRNA synthetase [Ustilago hordei], at 92031 to 92569 9334

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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89,170 + -0.1
89,229 - 0.8
89,508 - -0.2
89,684 + -0.1
89,863 - 0.3
89,949 + -1.6
90,054 - -0.6
90,054 + -0.4
90,189 + -2.0
90,191 - -1.2
90,336 - 9333 mRNA_965 0.19 0.9
90,632 - 9333 mRNA_965 0.40 1.9
90,643 + 9333 mRNA_965 0.41 0.0
90,902 + 9333 mRNA_965 0.60 1.8
90,923 - 9333 mRNA_965 0.62 -0.5
91,225 - 9333 mRNA_965 0.84 -0.3
91,326 + -0.3
91,357 + -0.3
91,371 + -2.0
91,468 + -0.5
91,468 + -0.4
91,469 - -0.9
91,614 - -0.1
91,615 - -0.1
91,617 + -0.2
91,642 + 1.0
91,650 - -1.2
91,805 - 0.9
91,816 + -0.4
91,951 + -0.3
91,953 + -0.5
91,970 - 1.4
91,974 - 1.4
91,988 + 0.3
92,075 - -0.1
92,116 + 9334 mRNA_966 0.16 0.8
92,210 + 9334 mRNA_966 0.33 0.7
92,386 + 9334 mRNA_966 0.66 -0.6
92,412 + 9334 mRNA_966 0.71 -0.3
92,413 + 9334 mRNA_966 0.71 -0.1