Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_911

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_910: 9278 - K00794 ribH, RIB4 6,7-dimethyl-8-ribityllumazine synthase, at 2176835 to 2177637 9278 mRNA_911: 9279 - KOG1773 Stress responsive protein, at 2177969 to 2178702 9279 mRNA_912: 9280 - Hypothetical Protein, at 2179052 to 2180263 9280

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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2,177,596 - -0.5
2,177,599 - -1.0
2,177,910 - 0.0
2,178,044 + 9279 mRNA_911 0.10 -0.5
2,178,335 - 9279 mRNA_911 0.50 0.2
2,178,336 - 9279 mRNA_911 0.50 -0.1
2,178,451 - 9279 mRNA_911 0.66 0.0
2,178,631 - -0.4
2,178,634 + 0.3
2,178,643 - 0.1
2,178,653 + -0.3
2,178,769 + 0.3
2,178,783 + -0.0
2,178,801 + -1.2
2,178,804 - 0.2
2,178,812 + 0.9
2,178,906 - 0.1
2,178,917 - -0.2
2,178,917 + 0.3
2,178,928 + 0.1
2,178,933 - 0.6
2,178,935 - -0.8
2,178,938 + -0.1
2,178,944 + -1.8
2,178,944 + -1.9
2,178,948 - 0.2
2,178,951 - 1.2
2,178,953 + -0.2
2,178,953 - 0.1
2,178,955 - -0.1
2,178,957 + 0.5
2,178,970 - -0.4
2,178,971 + -0.7
2,178,979 - -1.9
2,178,980 + -0.4
2,178,981 + 0.1
2,179,021 - 1.5
2,179,082 - 0.8
2,179,091 - 0.1
2,179,091 + -0.2
2,179,107 - 0.4
2,179,149 + -0.7
2,179,251 - 9280 mRNA_912 0.16 0.4
2,179,276 - 9280 mRNA_912 0.18 -1.0
2,179,415 - 9280 mRNA_912 0.30 -0.1