Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_909

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_908: 9276 - Hypothetical Protein, at 2172531 to 2173610 9276 mRNA_909: 9277 - KOG0254 Predicted transporter (major facilitator superfamily), at 2173901 to 2176309 9277 mRNA_910: 9278 - K00794 ribH, RIB4 6,7-dimethyl-8-ribityllumazine synthase, at 2176835 to 2177637 9278

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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2,172,918 - 9276 mRNA_908 0.36 0.3
2,172,934 - 9276 mRNA_908 0.37 0.1
2,173,039 - 9276 mRNA_908 0.47 0.5
2,173,079 + 9276 mRNA_908 0.51 -0.2
2,173,346 - 9276 mRNA_908 0.75 -0.1
2,173,362 - 9276 mRNA_908 0.77 0.3
2,173,778 + -0.2
2,173,781 - -0.3
2,174,501 + 9277 mRNA_909 0.25 1.5
2,174,821 + 9277 mRNA_909 0.38 -1.0
2,174,831 + 9277 mRNA_909 0.39 1.1
2,174,971 + 9277 mRNA_909 0.44 -0.4
2,175,022 + 9277 mRNA_909 0.47 0.5
2,175,078 + 9277 mRNA_909 0.49 -0.7
2,175,098 + 9277 mRNA_909 0.50 0.2
2,175,274 - 9277 mRNA_909 0.57 0.5
2,175,984 + 9277 mRNA_909 0.86 -0.0
2,175,985 - 9277 mRNA_909 0.87 0.2
2,176,276 + -0.1
2,176,427 - 0.1
2,176,440 + -1.3
2,176,459 - -0.3
2,176,468 - -0.4
2,176,570 - -0.8
2,176,705 - 0.2
2,176,713 - 1.0
2,176,718 - -0.7
2,176,719 + 2.0
2,176,728 + -0.6
2,176,744 + 2.3