Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_836

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_835: 9203 - K16365 SGTA small glutamine-rich tetratricopeptide repeat-containing protein alpha, at 1999158 to 2000866 9203 mRNA_836: 9204 - K17387 KIF23 kinesin family member 23, at 2001159 to 2005251 9204 mRNA_837: 9205 - KOG2061 Uncharacterized MYND Zn-finger protein, at 2005552 to 2007276 9205

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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2,000,292 - 9203 mRNA_835 0.66 0.5
2,000,355 - 9203 mRNA_835 0.70 -1.3
2,000,601 - 9203 mRNA_835 0.84 -0.3
2,000,607 + 9203 mRNA_835 0.85 -1.1
2,000,748 + -0.2
2,000,748 + -0.4
2,000,758 + -0.4
2,000,891 - -0.8
2,000,895 + 0.1
2,000,921 - -0.6
2,001,235 - -0.9
2,001,294 - -0.1
2,001,304 + -0.3
2,001,350 - -1.9
2,001,459 - -0.2
2,001,569 + 9204 mRNA_836 0.10 0.3
2,001,611 - 9204 mRNA_836 0.11 0.4
2,001,630 + 9204 mRNA_836 0.12 -0.7
2,001,752 - 9204 mRNA_836 0.14 -0.9
2,001,772 - 9204 mRNA_836 0.15 1.0
2,005,032 - 0.5
2,005,396 + -1.0