Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_826

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_825: 9193 - HMMPfam-Modifier of rudimentary (Mod(r)) protein-PF07200,ProSiteProfiles-VPS37 C-terminal domain profile.-PS51314,SUPERFAMILY--SSF140111, at 1976044 to 1976786 9193 mRNA_826: 9194 - HMMPfam-T-complex protein 11-PF05794, at 1977026 to 1979152 9194 mRNA_827: 9195 - Hypothetical Protein, at 1979229 to 1980332 9195

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,976,030 - 1.4
1,976,340 - 9193 mRNA_825 0.40 -1.5
1,976,616 - 9193 mRNA_825 0.77 -1.2
1,976,663 + 9193 mRNA_825 0.83 0.5
1,976,799 + -0.7
1,976,836 - -0.6
1,976,939 + -1.0
1,976,939 - -0.4
1,976,959 - 0.1
1,977,106 + -0.5
1,977,261 + 9194 mRNA_826 0.11 0.6
1,977,273 - 9194 mRNA_826 0.12 -0.6
1,978,150 + 9194 mRNA_826 0.53 0.9
1,978,313 - 9194 mRNA_826 0.61 0.0
1,978,562 + 9194 mRNA_826 0.72 -0.5
1,978,583 - 9194 mRNA_826 0.73 0.3
1,978,624 - 9194 mRNA_826 0.75 0.7
1,978,660 + 9194 mRNA_826 0.77 -0.0
1,978,760 - 9194 mRNA_826 0.82 -0.9
1,978,875 - 9194 mRNA_826 0.87 -0.9
1,978,896 + 9194 mRNA_826 0.88 1.4
1,978,953 - -0.5
1,978,970 + -1.4
1,979,039 - 0.5
1,979,063 + -0.6
1,979,082 + -0.4
1,979,108 - 1.8
1,979,133 - -0.8
1,979,140 + -0.4
1,979,174 - -1.1
1,979,358 + 9195 mRNA_827 0.12 0.2
1,979,956 - 9195 mRNA_827 0.66 -0.7
1,980,069 - 9195 mRNA_827 0.76 -0.1
1,980,080 + 9195 mRNA_827 0.77 -0.0