Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_720

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_719: 9087 - HMMPfam-Protein of unknown function (DUF3074)-PF11274, at 1716793 to 1718081 9087 mRNA_720: 9088 - K00993 EPT1 ethanolaminephosphotransferase, at 1718861 to 1720406 9088 mRNA_721: 9089 - Hypothetical Protein, at 1720522 to 1720982 9089

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,717,895 + 9087 mRNA_719 0.85 0.4
1,718,011 + -1.3
1,718,319 - 0.5
1,718,324 + 0.9
1,718,651 + 0.3
1,718,750 + -0.6
1,719,008 - -0.1
1,719,168 + 9088 mRNA_720 0.20 0.3
1,719,170 - 9088 mRNA_720 0.20 0.5
1,719,224 - 9088 mRNA_720 0.23 0.2
1,719,351 + 9088 mRNA_720 0.32 -0.2
1,719,625 - 9088 mRNA_720 0.49 0.2
1,720,329 - -1.0
1,720,339 + -1.1
1,721,110 + 1.0
1,721,218 + -0.7
1,721,236 + -0.2
1,721,237 + -1.0
1,721,374 - -0.2