Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_573

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_572: 8940 - Hypothetical Protein, at 1367917 to 1369757 8940 mRNA_573: 8941 - BLAST proteophosphoglycan 5 [Moniliophthora roreri MCA ..., at 1369955 to 1372100 8941 mRNA_574: 8942 - K02999 RPA1, POLR1A DNA-directed RNA polymerase I subunit RPA1, at 1372563 to 1378346 8942

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,369,402 + 8940 mRNA_572 0.81 0.1
1,369,860 - 0.1
1,370,167 + -0.5
1,371,292 + 8941 mRNA_573 0.62 -2.5
1,371,618 + 8941 mRNA_573 0.77 0.4
1,371,894 + -1.0
1,372,056 - -0.0
1,372,160 - -0.3
1,372,171 - -1.1
1,372,182 + -0.9
1,372,186 + -0.8
1,372,200 - -0.7
1,372,204 + 0.3
1,372,206 + 0.4
1,372,209 + -1.1
1,372,210 + -1.0
1,372,223 + -0.1
1,372,338 - -0.9
1,372,522 + -0.7