Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_167

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_166: 8534 - K07936 RAN GTP-binding nuclear protein Ran, at 409327 to 410564 8534 mRNA_167: 8535 - KOG1471 Phosphatidylinositol transfer protein SEC14 and related proteins, at 411108 to 413532 8535 mRNA_168: 8536 - K01598 PPCDC, coaC phosphopantothenoylcysteine decarboxylase, at 413984 to 414971 8536

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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411,063 + -0.4
411,085 + -0.4
411,094 + -2.3
411,103 - 0.6
411,214 - 0.0
411,217 - -0.6
411,221 + 0.3
411,226 + -1.4
411,379 - 8535 mRNA_167 0.11 -0.4
411,385 - 8535 mRNA_167 0.11 -0.4
411,387 + 8535 mRNA_167 0.12 0.3
411,397 + 8535 mRNA_167 0.12 -0.3
411,493 - 8535 mRNA_167 0.16 -0.2
411,536 + 8535 mRNA_167 0.18 -0.0
411,694 + 8535 mRNA_167 0.24 1.3
411,719 + 8535 mRNA_167 0.25 -0.3
411,812 + 8535 mRNA_167 0.29 -1.1
411,823 + 8535 mRNA_167 0.29 -0.6
411,825 + 8535 mRNA_167 0.30 0.7
411,827 - 8535 mRNA_167 0.30 -0.3
411,828 - 8535 mRNA_167 0.30 1.8
411,893 - 8535 mRNA_167 0.32 0.7
411,895 + 8535 mRNA_167 0.32 0.0
411,969 - 8535 mRNA_167 0.36 -0.3
411,972 - 8535 mRNA_167 0.36 -0.5
412,324 - 8535 mRNA_167 0.50 -0.4
412,855 + 8535 mRNA_167 0.72 -0.9
413,108 - 8535 mRNA_167 0.82 0.6
413,162 - 8535 mRNA_167 0.85 0.5
413,412 - -1.2
413,841 - -0.2
413,855 + 0.5
413,872 + -0.1