Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_150

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_149: 8517 - Hypothetical Protein, at 374872 to 375333 8517 mRNA_150: 8518 - HMMPfam-Beta-glucan synthesis-associated protein (SKN1)-PF03935,SUPERFAMILY--SSF49899, at 375753 to 378108 8518 mRNA_151: 8519 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 379065 to 379994 8519

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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374,759 - -0.3
374,820 + -0.8
374,824 - 1.2
374,942 - 8517 mRNA_149 0.15 -1.4
374,983 + 8517 mRNA_149 0.24 0.4
375,100 + 8517 mRNA_149 0.49 0.3
375,131 + 8517 mRNA_149 0.56 -0.2
375,138 + 8517 mRNA_149 0.58 -0.7
375,140 + 8517 mRNA_149 0.58 -0.3
375,249 + 8517 mRNA_149 0.82 1.4
375,258 + 8517 mRNA_149 0.84 -0.5
376,011 + 8518 mRNA_150 0.11 -0.3
376,300 - 8518 mRNA_150 0.23 -0.2
376,896 + 8518 mRNA_150 0.49 -2.2
377,138 - 8518 mRNA_150 0.59 -0.9
377,142 - 8518 mRNA_150 0.59 -1.2
377,304 - 8518 mRNA_150 0.66 -0.7
377,442 - 8518 mRNA_150 0.72 0.2
377,586 + 8518 mRNA_150 0.78 -0.7
377,903 - 0.2
378,023 - 0.2
378,076 - 0.6
378,289 - -0.5
378,324 - -1.5
378,327 + 1.0
378,428 + 0.1
378,443 - -0.9
378,465 + -0.3
378,468 - -0.3
378,500 + -0.6
378,610 - -0.1
378,611 - -2.2
378,613 - -0.1
378,614 + -0.1
378,614 - 1.2
378,616 + 0.1
378,618 + -1.1
378,619 - 0.6
378,624 + -0.5
378,629 - -1.6
378,639 - -0.7
378,658 + 0.5
378,663 - 0.1
378,759 - -0.7
378,763 + -2.0
378,769 + -0.4
378,794 - -0.9
378,797 - -0.8
378,797 - 0.1
378,799 - -0.1
378,800 + -1.6
378,804 + 0.2
378,808 + -0.1
378,812 + -0.2
378,813 - 0.2
378,825 + 1.1
378,827 - -0.6
378,829 - -0.9
378,831 - 0.0
378,875 + -0.1
378,954 - -0.5
378,957 - -0.3
378,959 - -0.4
378,994 + 0.5
378,995 - -0.0