Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_65

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_64: 8432 - HMMPfam-Transcription initiation factor TFIID component TAF4 family-PF05236, at 148573 to 150625 8432 mRNA_65: 8433 - K12882 NCBP1, CBP80 nuclear cap-binding protein subunit 1, at 150773 to 154577 8433 mRNA_66: 8434 - K15118 SLC25A38 solute carrier family 25, member 38, at 154666 to 156000 8434

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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150,642 - -0.5
150,829 - -1.1
150,968 - -0.8
151,142 - -0.7
152,610 - 8433 mRNA_65 0.48 0.1
152,771 + 8433 mRNA_65 0.53 -1.9
153,025 + 8433 mRNA_65 0.59 -0.7
153,880 - 8433 mRNA_65 0.82 1.7
154,127 + 8433 mRNA_65 0.88 -0.7
154,469 + 0.5
154,529 + 0.0
154,555 + -0.1
154,618 - 0.1
155,507 + 8434 mRNA_66 0.63 -0.1
155,513 - 8434 mRNA_66 0.63 -0.8
155,516 + 8434 mRNA_66 0.64 -0.6