Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_64

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_63: 8431 - K01800 maiA, GSTZ1 maleylacetoacetate isomerase, at 147081 to 148199 8431 mRNA_64: 8432 - HMMPfam-Transcription initiation factor TFIID component TAF4 family-PF05236, at 148573 to 150625 8432 mRNA_65: 8433 - K12882 NCBP1, CBP80 nuclear cap-binding protein subunit 1, at 150773 to 154577 8433

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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147,574 + 8431 mRNA_63 0.44 0.6
148,110 - -0.7
148,151 + 0.7
148,306 + -0.6
148,419 - 1.1
148,426 - -0.1
148,435 - 1.1
148,437 + 3.0
148,448 - -0.3
149,381 + 8432 mRNA_64 0.39 -0.2
150,642 - -0.5
150,829 - -1.1
150,968 - -0.8
151,142 - -0.7