Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_63

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_62: 8430 - HMMPfam-HPP family-PF04982, at 145631 to 146829 8430 mRNA_63: 8431 - K01800 maiA, GSTZ1 maleylacetoacetate isomerase, at 147081 to 148199 8431 mRNA_64: 8432 - HMMPfam-Transcription initiation factor TFIID component TAF4 family-PF05236, at 148573 to 150625 8432

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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146,200 + 8430 mRNA_62 0.47 0.1
146,202 - 8430 mRNA_62 0.48 -0.1
146,370 - 8430 mRNA_62 0.62 0.6
146,493 + 8430 mRNA_62 0.72 0.7
146,518 - 8430 mRNA_62 0.74 -0.7
146,763 + -0.1
146,959 - 0.6
147,238 + 8431 mRNA_63 0.14 -0.1
147,279 - 8431 mRNA_63 0.18 -0.2
147,308 + 8431 mRNA_63 0.20 -1.1
147,574 + 8431 mRNA_63 0.44 0.6
148,110 - -0.7
148,151 + 0.7
148,306 + -0.6
148,419 - 1.1
148,426 - -0.1
148,435 - 1.1
148,437 + 3.0
148,448 - -0.3