Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8394

Experiments: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8393: 16761 - K12385 NPC1 Niemann-Pick C1 protein, at 1108603 to 1114039 16761 mRNA_8394: 16762 - KOG3680 Uncharacterized conserved protein, at 1114553 to 1119513 16762 mRNA_8395: 16763 - SUPERFAMILY--SSF52047, at 1119619 to 1120614 16763

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
1,113,786 - -0.4
1,113,786 - -0.4
1,113,786 - 0.7
1,113,787 - 1.0
1,113,791 + 0.7
1,113,942 - 1.4
1,114,060 - -0.1
1,114,108 - -1.4
1,114,245 + 1.1
1,114,259 - 1.1
1,114,272 - 0.1
1,114,533 + 0.6
1,114,697 + 0.9
1,114,699 + -0.3
1,114,701 + -0.6
1,114,703 - 0.5
1,114,996 + 0.7
1,115,217 + 16762 mRNA_8394 0.13 -0.6
1,115,668 + 16762 mRNA_8394 0.22 -1.3
1,117,384 + 16762 mRNA_8394 0.57 -0.9
1,117,404 - 16762 mRNA_8394 0.57 1.7
1,117,712 + 16762 mRNA_8394 0.64 -1.2
1,117,741 + 16762 mRNA_8394 0.64 1.0
1,117,979 - 16762 mRNA_8394 0.69 -1.8
1,118,304 + 16762 mRNA_8394 0.76 -0.1
1,118,351 + 16762 mRNA_8394 0.77 0.0
1,118,643 + 16762 mRNA_8394 0.82 0.6
1,118,710 - 16762 mRNA_8394 0.84 0.0
1,118,714 + 16762 mRNA_8394 0.84 0.2
1,118,726 + 16762 mRNA_8394 0.84 0.4
1,118,882 - 16762 mRNA_8394 0.87 0.7
1,119,037 + 0.3
1,119,132 + -1.0
1,119,133 + -0.1
1,119,148 + -0.6
1,119,305 - -0.3
1,119,305 - -0.4
1,119,314 + -0.1
1,119,389 - -0.2
1,119,511 + -0.4
1,119,565 + -1.6
1,119,596 + -0.5
1,119,753 + 16763 mRNA_8395 0.13 0.5
1,119,926 + 16763 mRNA_8395 0.31 0.0
1,120,219 - 16763 mRNA_8395 0.60 0.7
1,120,351 + 16763 mRNA_8395 0.73 0.1
1,120,453 - 16763 mRNA_8395 0.84 1.4