Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8382

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8381: 16749 - Hypothetical Protein, at 1078758 to 1080099 16749 mRNA_8382: 16750 - K00799 GST, gst glutathione S-transferase, at 1080378 to 1081397 16750 mRNA_8383: 16751 - Interpro Stealth protein CR2, conserved region 2 Stealth protein CR3, conserved region 3, at 1081454 to 1084319 16751

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,079,543 - 16749 mRNA_8381 0.58 -0.3
1,079,579 - 16749 mRNA_8381 0.61 0.1
1,079,701 + 16749 mRNA_8381 0.70 0.1
1,079,836 - 16749 mRNA_8381 0.80 0.1
1,080,006 - -0.4
1,080,168 - -1.6
1,080,260 - -1.5
1,080,264 - -0.4
1,080,288 - 0.6
1,080,294 - -0.2
1,080,307 - 0.0
1,080,486 - 16750 mRNA_8382 0.11 0.1
1,080,488 + 16750 mRNA_8382 0.11 0.2
1,080,601 + 16750 mRNA_8382 0.22 -1.2
1,080,776 + 16750 mRNA_8382 0.39 1.6
1,080,992 - 16750 mRNA_8382 0.60 0.6
1,081,047 + 16750 mRNA_8382 0.66 0.3
1,081,171 - 16750 mRNA_8382 0.78 1.0
1,081,272 - 16750 mRNA_8382 0.88 0.9
1,081,336 + -0.8
1,081,345 + 0.0
1,081,592 - -1.2
1,082,099 + 16751 mRNA_8383 0.23 0.2
1,082,177 - 16751 mRNA_8383 0.25 -1.8
1,082,211 - 16751 mRNA_8383 0.26 -2.7
1,082,225 + 16751 mRNA_8383 0.27 0.3