Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8251

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8250: 16618 - K17069 MET17 O-acetylhomoserine/O-acetylserine sulfhydrylase, at 764459 to 766227 16618 mRNA_8251: 16619 - HMMPfam-SacI homology domain-PF02383,ProSiteProfiles-Sac phosphatase domain profile.-PS50275, at 766880 to 770400 16619 mRNA_8252: 16620 - HMMPfam-Domain of unknown function (DUF4451)-PF14616, at 770970 to 773846 16620

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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765,908 + 16618 mRNA_8250 0.82 -0.6
766,023 + 16618 mRNA_8250 0.88 -1.1
766,059 + 0.2
766,071 - -0.1
766,201 - -0.4
766,214 + -0.0
766,284 - -0.2
766,331 - -2.9
766,340 - -1.0
766,358 - -0.5
766,505 + -0.4
766,651 - 0.3
766,655 + 0.8
766,667 + -0.9
766,958 - -1.2
767,244 - 16619 mRNA_8251 0.10 0.9
767,251 - 16619 mRNA_8251 0.11 -1.9
767,399 + 16619 mRNA_8251 0.15 0.9
767,961 - 16619 mRNA_8251 0.31 -0.0
768,124 + 16619 mRNA_8251 0.35 1.9
768,250 + 16619 mRNA_8251 0.39 -0.4
768,269 + 16619 mRNA_8251 0.39 0.4
768,519 + 16619 mRNA_8251 0.47 -0.9
768,540 + 16619 mRNA_8251 0.47 -0.1
768,791 - 16619 mRNA_8251 0.54 -1.6
768,817 + 16619 mRNA_8251 0.55 0.7
769,109 - 16619 mRNA_8251 0.63 -0.7
769,227 + 16619 mRNA_8251 0.67 2.5
769,319 + 16619 mRNA_8251 0.69 0.9
769,396 + 16619 mRNA_8251 0.71 -0.5
770,315 - 0.2
770,404 + 0.1
770,427 - -2.3
770,438 + -0.1
770,445 + -0.7
770,453 + -0.9
770,461 + -0.3
770,461 - -0.1
770,581 - 0.4
770,584 - -0.6
770,736 - -1.3
770,748 - -0.5
770,749 - -0.1
770,750 + 0.1
770,778 + -1.2
770,913 + -1.9
770,916 - -1.2
770,923 - 0.2
771,059 - 2.6
771,254 - -1.4