Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8213

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8212: 16580 - K17878 NNT1 nicotinamide N-methyltransferase, at 680778 to 681996 16580 mRNA_8213: 16581 - KOG1590 Uncharacterized conserved protein, at 682134 to 683094 16581 mRNA_8214: 16582 - BLAST NADH-ubiquinone oxidoreductase 9.5 kDa subunit [R..., at 683320 to 684168 16582

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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681,180 - 16580 mRNA_8212 0.33 -0.6
681,482 - 16580 mRNA_8212 0.58 0.6
681,514 + 16580 mRNA_8212 0.60 -0.4
681,782 - 16580 mRNA_8212 0.82 -0.8
681,808 - 16580 mRNA_8212 0.84 0.4
681,812 + 16580 mRNA_8212 0.85 -1.4
681,931 - -0.4
681,934 - -0.1
681,942 - 0.3
682,066 - -0.6
682,067 - -0.9
682,074 - 0.7
682,080 + -0.4
682,085 - -0.6
682,085 + -0.0
682,087 - 0.4
682,109 + 0.1
682,230 - 16581 mRNA_8213 0.10 -0.4
682,230 - 16581 mRNA_8213 0.10 1.7
683,114 + -0.1
683,270 - -0.3
683,977 + 16582 mRNA_8214 0.77 -0.3