Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8172

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8172: 16540 - K17592 SACS sacsin, at 590465 to 596519 16540 mRNA_8173: 16541 - HMMPfam-Glutathione-dependent formaldehyde-activating enzyme-PF04828,SUPERFAMILY--SSF51316, at 596757 to 597514 16541

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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589,652 + -1.6
589,692 + -0.3
589,835 + -0.3
589,987 - 0.3
590,106 - 0.0
590,112 - -0.7
590,123 + -0.1
590,256 + -0.7
590,258 - 0.3
590,268 + -0.4
590,270 + -1.3
590,294 - 0.5
590,427 + 0.2
590,452 - 1.3
590,594 - -0.4
590,790 - 1.1
591,057 + -0.5
591,306 - 16540 mRNA_8172 0.14 0.2
591,315 + 16540 mRNA_8172 0.14 -1.1
591,486 + 16540 mRNA_8172 0.17 1.1
591,592 - 16540 mRNA_8172 0.19 -0.6
591,754 - 16540 mRNA_8172 0.21 -0.1
592,493 + 16540 mRNA_8172 0.33 -0.7
592,836 + 16540 mRNA_8172 0.39 0.8
592,917 - 16540 mRNA_8172 0.40 -0.3
593,098 - 16540 mRNA_8172 0.43 -1.1
593,885 - 16540 mRNA_8172 0.56 1.7
594,434 + 16540 mRNA_8172 0.66 0.9
594,441 + 16540 mRNA_8172 0.66 -0.3
594,453 + 16540 mRNA_8172 0.66 0.1
595,137 + 16540 mRNA_8172 0.77 0.4
595,285 - 16540 mRNA_8172 0.80 -0.8
595,676 - 16540 mRNA_8172 0.86 -0.1
595,787 - 16540 mRNA_8172 0.88 0.3
595,921 - 1.3
596,404 - -0.7
596,532 + -0.0
596,941 + 16541 mRNA_8173 0.24 -1.5