Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8167

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8166: 16534 - BLAST receptor-activated Ca2+-permeable cation channel [Aur..., at 571164 to 574503 16534 mRNA_8167: 16535 - K04350 RASGRP1 RAS guanyl-releasing protein 1, at 574672 to 578875 16535

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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573,793 - 16534 mRNA_8166 0.79 -1.3
573,943 + 16534 mRNA_8166 0.83 1.1
574,588 + 1.2
574,592 + 0.5
574,700 - 0.1
574,817 - -2.4
574,887 + 0.9
575,030 + -0.8
575,205 - 16535 mRNA_8167 0.13 0.5
575,259 - 16535 mRNA_8167 0.14 0.1
575,470 + 16535 mRNA_8167 0.19 -0.5
575,645 + 16535 mRNA_8167 0.23 0.5
575,723 + 16535 mRNA_8167 0.25 0.5
575,831 - 16535 mRNA_8167 0.28 -0.3
575,931 + 16535 mRNA_8167 0.30 -0.1
575,981 - 16535 mRNA_8167 0.31 0.4
576,033 - 16535 mRNA_8167 0.32 -1.0
576,053 - 16535 mRNA_8167 0.33 0.4
576,064 + 16535 mRNA_8167 0.33 -0.0
576,214 + 16535 mRNA_8167 0.37 -0.0
576,463 + 16535 mRNA_8167 0.43 0.0
576,492 + 16535 mRNA_8167 0.43 1.1
576,540 - 16535 mRNA_8167 0.44 -1.4
576,579 - 16535 mRNA_8167 0.45 0.5
576,666 - 16535 mRNA_8167 0.47 -0.3
576,789 - 16535 mRNA_8167 0.50 1.0
576,793 - 16535 mRNA_8167 0.50 -0.6
577,312 + 16535 mRNA_8167 0.63 -1.1
577,390 + 16535 mRNA_8167 0.65 -0.2
577,422 - 16535 mRNA_8167 0.65 -1.5
577,623 + 16535 mRNA_8167 0.70 -0.2
578,628 + -1.0
578,756 + -0.2
579,086 + 0.1
579,181 - -0.1
579,182 - -0.5
579,184 + 0.5
579,187 - 0.4
579,199 + -1.0
579,316 - -0.6
579,324 - -0.1
579,341 + -0.3
579,620 - -0.1
579,643 - -1.0
579,779 + 0.1
579,816 + 0.4