Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8161

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8160: 16528 - K01873 VARS, valS valyl-tRNA synthetase, at 555144 to 559347 16528 mRNA_8161: 16529 - BLAST Actin cytoskeleton-regulatory complex protein pan1 [R..., at 559527 to 560747 16529 mRNA_8162: 16530 - K01288 KEX1 carboxypeptidase D, at 560914 to 563494 16530

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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559,396 - 0.9
559,433 + -0.4
559,438 + -2.5
559,564 - -1.2
559,573 - -1.7
559,619 + -0.3
559,649 - 16529 mRNA_8161 0.10 -0.0
559,650 - 16529 mRNA_8161 0.10 -1.2
559,718 + 16529 mRNA_8161 0.16 0.2
559,735 - 16529 mRNA_8161 0.17 0.7
559,740 + 16529 mRNA_8161 0.17 0.8
559,890 - 16529 mRNA_8161 0.30 -1.5
559,975 + 16529 mRNA_8161 0.37 1.1
560,169 - 16529 mRNA_8161 0.53 0.2
560,257 - 16529 mRNA_8161 0.60 -0.1
560,450 + 16529 mRNA_8161 0.76 -0.5
560,566 - 16529 mRNA_8161 0.85 -0.5
560,927 - -0.2
561,340 - 16530 mRNA_8162 0.17 -0.1
561,357 - 16530 mRNA_8162 0.17 0.2
561,360 + 16530 mRNA_8162 0.17 0.4
561,629 + 16530 mRNA_8162 0.28 0.2
561,645 + 16530 mRNA_8162 0.28 0.2