Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8136

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8135: 16503 - K00804 GGPS1 geranylgeranyl diphosphate synthase, type III, at 500872 to 502376 16503 mRNA_8136: 16504 - KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies, at 502588 to 504412 16504 mRNA_8137: 16505 - K00586 DPH5 diphthine methyl ester synthase, at 505150 to 506230 16505

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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502,307 + 0.0
502,393 - 0.1
502,783 - 16504 mRNA_8136 0.11 -0.6
503,037 - 16504 mRNA_8136 0.25 -1.3
503,176 + 16504 mRNA_8136 0.32 -0.5
503,254 - 16504 mRNA_8136 0.36 -0.3
503,452 - 16504 mRNA_8136 0.47 0.1
503,904 + 16504 mRNA_8136 0.72 0.5
503,909 - 16504 mRNA_8136 0.72 -0.7
504,074 + 16504 mRNA_8136 0.81 0.9
504,375 + 0.4
504,562 + -0.2
504,776 + -0.0
504,955 + 0.0
505,077 - 2.2
505,090 + -0.7
505,221 + -0.5
505,359 + 16505 mRNA_8137 0.19 1.8