Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8124

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8123: 16491 - Hypothetical Protein, at 473388 to 473878 16491 mRNA_8124: 16492 - HMMPfam-FHA domain-PF00498,ProSiteProfiles-Forkhead-associated (FHA) domain profile.-PS50006,SMART-Forkhead associated domain-SM00240,SUPERFAMILY--SSF49879, at 474474 to 477508 16492 mRNA_8125: 16493 - Hypothetical Protein, at 478218 to 479543 16493

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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473,735 - 16491 mRNA_8123 0.71 0.9
473,866 - 0.3
473,867 - -0.9
473,870 - -0.2
473,945 - 0.1
474,191 + -1.0
474,191 - 0.3
474,212 + -1.5
474,274 + -1.2
474,382 - -0.6
474,478 + 0.7
474,489 + -0.1
474,733 - 0.8
475,653 + 16492 mRNA_8124 0.39 0.8
475,836 - 16492 mRNA_8124 0.45 -0.5
476,525 + 16492 mRNA_8124 0.68 -0.2
477,067 - 16492 mRNA_8124 0.85 0.2
477,389 + -0.1
477,393 - -1.3
477,418 + 0.7
477,726 + -0.6
477,728 + -0.2
477,740 - 0.8
477,743 + -1.1
477,743 + -0.2
477,743 + 0.0
477,880 + -0.4
477,889 - 0.7
477,994 - -1.2
478,074 + 1.0
478,308 - -0.0
478,442 - 16493 mRNA_8125 0.17 -0.2