Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8071

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8070: 16438 - KOG2744 DNA-binding proteins Bright/BRCAA1/RBP1 and related proteins containing BRIGHT domain, at 352971 to 356378 16438 mRNA_8071: 16439 - Hypothetical Protein, at 357161 to 359241 16439 mRNA_8072: 16440 - K14684 SLC25A23S solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41, at 359607 to 361273 16440

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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356,185 - -0.4
356,224 + 0.7
356,228 + -1.7
356,331 - -0.3
356,336 + 0.7
356,344 + -1.4
356,361 + 0.7
356,372 - 0.6
356,373 - 0.7
356,374 - -0.1
356,389 + -0.8
356,390 + -0.6
356,411 - 0.9
356,431 - -1.0
356,460 + -0.7
356,492 + -0.1
356,492 + 0.0
356,499 + 0.2
356,506 + -0.4
356,533 + -1.1
356,534 - 0.1
356,597 - 0.2
356,608 + -0.1
356,611 - -0.3
356,613 - -0.5
356,614 + 0.1
356,614 + -1.6
356,614 - 0.3
356,618 + -0.9
356,620 + 1.0
356,626 + 2.0
356,626 + -0.5
356,628 - -0.9
356,630 - 0.3
356,633 - -0.7
356,636 + -0.2
356,639 - 0.1
356,658 - -0.9
356,764 - -0.8
356,852 - 0.2
356,866 - 0.8
356,886 - -0.4
356,909 + -0.0
356,916 + 0.0
356,918 - -0.9
356,934 + -1.6
356,934 - 0.0
356,935 + -0.3
356,936 - 0.1
356,949 - -1.3
356,950 - -0.2
356,967 - 1.5
356,997 + 1.2
357,026 + 1.6
357,077 + 0.8
357,128 - -0.1
357,223 + -0.8
357,808 + 16439 mRNA_8071 0.31 -0.3
357,951 + 16439 mRNA_8071 0.38 -0.1
358,118 + 16439 mRNA_8071 0.46 0.4
358,528 + 16439 mRNA_8071 0.66 -0.2
358,538 - 16439 mRNA_8071 0.66 -0.1
358,676 - 16439 mRNA_8071 0.73 0.6
358,979 - 16439 mRNA_8071 0.87 -1.0
358,991 + 16439 mRNA_8071 0.88 -1.1
359,119 - -0.2
359,134 + 0.2
359,162 + 0.1
359,279 + -0.8
359,286 - 0.1
359,300 - 1.0
359,420 + -0.8
359,431 - 0.3
359,431 + 0.1
359,447 - 1.1
359,698 - -0.7
359,744 + -0.7
359,748 - 2.3
360,047 - 16440 mRNA_8072 0.26 0.5
360,146 - 16440 mRNA_8072 0.32 -0.7
360,172 - 16440 mRNA_8072 0.34 -0.5