Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7992

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7991: 16359 - K02132 ATPeF1A, ATP5A1, ATP1 F-type H+-transporting ATPase subunit alpha, at 160884 to 163546 16359 mRNA_7992: 16360 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 164059 to 164941 16360 mRNA_7993: 16361 - Hypothetical Protein, at 165037 to 166382 16361

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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163,573 + -0.8
163,616 - -1.6
163,747 - 0.0
163,756 + -0.3
164,105 - 0.0
164,109 - 1.4
164,184 + 16360 mRNA_7992 0.14 2.3
164,412 - 16360 mRNA_7992 0.40 1.2
164,716 - 16360 mRNA_7992 0.74 -0.5
164,840 + 16360 mRNA_7992 0.88 -0.8
164,854 - 0.9
165,128 - -0.7
165,166 + 0.1
165,299 + 16361 mRNA_7993 0.19 -0.5
165,339 + 16361 mRNA_7993 0.22 -0.3
165,437 - 16361 mRNA_7993 0.30 -0.9
165,462 - 16361 mRNA_7993 0.32 -0.2
165,559 + 16361 mRNA_7993 0.39 -1.2
165,758 - 16361 mRNA_7993 0.54 -0.7