Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7974

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7973: 16341 - KOG3511 Sortilin and related receptors, at 122692 to 128410 16341 mRNA_7974: 16342 - Hypothetical Protein, at 128673 to 129137 16342 mRNA_7975: 16343 - KOG0762 Mitochondrial carrier protein, at 129725 to 131537 16343

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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128,185 - -2.2
128,281 - -0.4
128,321 + -0.9
128,321 + -0.3
128,574 - -0.1
128,574 + -0.9
128,575 + 0.6
128,575 + -0.3
128,575 + -0.7
128,581 + 0.3
128,587 - 0.6
128,598 + -0.2
128,598 - -0.7
128,603 + -0.5
128,603 + 1.6
128,609 + 0.7
128,609 + -0.2
128,614 + -0.2
128,714 + -0.1
128,722 - 16342 mRNA_7974 0.11 -1.4
128,872 - 16342 mRNA_7974 0.43 -2.4
128,877 + 16342 mRNA_7974 0.44 -1.9
128,897 - 16342 mRNA_7974 0.48 1.4
129,203 + 0.1
129,230 - 0.0
129,307 - -0.8
129,309 + 0.2
129,309 + 1.3
129,312 - 0.0
129,320 - -0.2
129,338 + 1.1
129,462 - 0.2
129,590 + -0.1
129,638 + -0.8
129,730 - -0.8
129,882 - -0.2
129,895 + 0.1
130,032 - 16343 mRNA_7975 0.17 0.1
130,050 - 16343 mRNA_7975 0.18 -0.4