Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7821

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7820: 16188 - Hypothetical Protein, at 1144950 to 1145793 16188 mRNA_7821: 16189 - Hypothetical Protein, at 1146183 to 1147264 16189 mRNA_7822: 16190 - Hypothetical Protein, at 1147761 to 1148329 16190

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,145,249 + 16188 mRNA_7820 0.35 0.3
1,145,260 - 16188 mRNA_7820 0.37 -3.4
1,145,390 + 16188 mRNA_7820 0.52 -0.5
1,145,399 - 16188 mRNA_7820 0.53 0.6
1,145,822 - -1.1
1,145,832 + 1.0
1,145,847 - 0.3
1,145,981 + -0.2
1,145,982 - -0.6
1,146,029 - 0.8
1,146,239 + -2.4
1,146,282 + 0.4
1,146,417 + 16189 mRNA_7821 0.22 -0.1
1,146,486 - 16189 mRNA_7821 0.28 -0.6
1,146,546 - 16189 mRNA_7821 0.34 -0.3
1,146,570 - 16189 mRNA_7821 0.36 2.4
1,146,857 - 16189 mRNA_7821 0.62 -0.1
1,146,863 - 16189 mRNA_7821 0.63 -0.1
1,146,987 - 16189 mRNA_7821 0.74 0.4
1,147,029 + 16189 mRNA_7821 0.78 0.7
1,147,148 - 16189 mRNA_7821 0.89 -2.6
1,147,178 + 2.1
1,147,188 + 0.2
1,147,317 - 0.3
1,147,327 + 0.2
1,147,333 + -0.8
1,147,707 - 0.5
1,147,713 + -0.1
1,147,872 + 16190 mRNA_7822 0.20 -1.8
1,148,188 + 16190 mRNA_7822 0.75 -0.1