Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7767

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7767: 16135 - ProSiteProfiles-LIS1 homology (LisH) motif profile.-PS50896, at 1018702 to 1022173 16135 mRNA_7768: 16136 - SUPERFAMILY--SSF52058, at 1022363 to 1024489 16136

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,017,740 - -1.0
1,017,771 - 0.9
1,017,917 - 1.0
1,018,056 - -1.1
1,018,068 + 0.7
1,018,074 + -0.7
1,018,221 - -1.9
1,018,233 - -1.0
1,018,234 + -0.4
1,018,278 - 0.1
1,018,385 - -0.5
1,018,386 + -0.8
1,018,405 - 1.7
1,018,412 + -0.7
1,018,427 + 0.2
1,018,578 + -0.5
1,018,579 + 0.3
1,018,585 - -1.0
1,018,728 - -0.2
1,018,732 - -0.5
1,018,831 - -0.6
1,018,881 + -1.3
1,018,884 + -0.4
1,019,013 - -0.3
1,019,573 + 16135 mRNA_7767 0.25 1.0
1,019,743 - 16135 mRNA_7767 0.30 0.3
1,019,744 + 16135 mRNA_7767 0.30 -0.4
1,019,845 - 16135 mRNA_7767 0.33 -1.4
1,019,871 - 16135 mRNA_7767 0.34 0.0
1,019,907 - 16135 mRNA_7767 0.35 -0.3
1,020,146 + 16135 mRNA_7767 0.42 -0.8
1,020,472 + 16135 mRNA_7767 0.51 -1.2
1,020,475 + 16135 mRNA_7767 0.51 0.4
1,020,478 - 16135 mRNA_7767 0.51 0.7
1,020,657 + 16135 mRNA_7767 0.56 -0.1
1,021,304 + 16135 mRNA_7767 0.75 -0.1
1,021,372 - 16135 mRNA_7767 0.77 1.7
1,021,439 - 16135 mRNA_7767 0.79 -0.3
1,021,449 + 16135 mRNA_7767 0.79 1.1
1,021,668 + 16135 mRNA_7767 0.85 -0.2
1,021,750 - 16135 mRNA_7767 0.88 0.1
1,021,970 + 0.1
1,022,160 + -0.3
1,022,166 + -0.2
1,022,171 - 1.5
1,022,297 + 0.9
1,022,330 + 0.0
1,022,414 - -1.3
1,022,414 - 0.4
1,022,495 - -0.2
1,022,758 - 16136 mRNA_7768 0.19 0.1
1,022,812 + 16136 mRNA_7768 0.21 0.5
1,023,054 - 16136 mRNA_7768 0.32 -0.1