Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7715

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7714: 16082 - Hypothetical Protein, at 910983 to 911507 16082 mRNA_7715: 16083 - K05906 PCYOX1, FCLY prenylcysteine oxidase / farnesylcysteine lyase, at 912208 to 914199 16083 mRNA_7716: 16084 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 914377 to 916926 16084

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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911,224 + 16082 mRNA_7714 0.46 1.0
911,356 + 16082 mRNA_7714 0.71 2.0
911,405 + 16082 mRNA_7714 0.80 -1.8
911,405 + 16082 mRNA_7714 0.80 -0.6
911,683 - -0.0
911,822 + -0.0
912,027 + -0.9
912,030 + -1.4
912,149 - -2.0
912,215 - -0.6
912,249 + 0.3
912,265 - -1.6
912,369 + 0.5
912,378 + 0.9
912,528 - 16083 mRNA_7715 0.16 0.2
913,183 - 16083 mRNA_7715 0.49 0.3
913,428 + 16083 mRNA_7715 0.61 -0.2
913,558 - 16083 mRNA_7715 0.68 -0.0
913,778 - 16083 mRNA_7715 0.79 -0.1
913,848 + 16083 mRNA_7715 0.82 1.0
913,859 - 16083 mRNA_7715 0.83 0.6
913,997 - 16083 mRNA_7715 0.90 0.2
914,316 - 1.7
914,340 - -1.1
914,461 + 0.5
914,555 + -1.2
914,617 - -0.6
914,621 + -0.6
914,806 + 16084 mRNA_7716 0.17 -0.3
915,005 + 16084 mRNA_7716 0.25 1.1
915,067 - 16084 mRNA_7716 0.27 1.4
915,177 - 16084 mRNA_7716 0.31 1.8