Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7654

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7653: 16021 - K15216 RRN3, TIFIA RNA polymerase I-specific transcription initiation factor RRN3, at 773095 to 776030 16021 mRNA_7654: 16022 - K06911 K06911 uncharacterized protein, at 776597 to 777755 16022 mRNA_7655: 16023 - K12194 CHMP4, SNF7, VPS32 charged multivesicular body protein 4, at 778145 to 779164 16023

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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775,832 + -0.3
775,898 - -0.9
776,142 - -0.8
776,257 - -0.7
776,276 - -0.3
776,289 + -0.7
776,429 - -0.7
776,432 - 0.2
776,445 + 0.9
776,452 - 1.4
776,452 - -1.1
776,462 - -0.2
776,494 + -0.6
776,602 - 1.5
776,748 + 16022 mRNA_7654 0.13 -0.2
776,770 + 16022 mRNA_7654 0.15 0.2
777,005 + 16022 mRNA_7654 0.35 0.2
777,043 + 16022 mRNA_7654 0.38 0.8
777,063 + 16022 mRNA_7654 0.40 0.5
777,474 - 16022 mRNA_7654 0.76 1.0
777,624 - 16022 mRNA_7654 0.89 -0.6
777,803 + -0.4
777,870 + 0.1
777,875 - -0.8
777,915 + 0.7
777,916 - -1.9
778,080 - 0.2
778,665 - 16023 mRNA_7655 0.51 -1.1