Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7598

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7597: 15965 - Hypothetical Protein, at 648262 to 649679 15965 mRNA_7598: 15966 - K01102 PDP pyruvate dehydrogenase phosphatase, at 649917 to 652257 15966 mRNA_7599: 15967 - K01900 LSC2 succinyl-CoA synthetase beta subunit, at 652530 to 654489 15967

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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649,134 - 15965 mRNA_7597 0.61 0.1
649,274 - 15965 mRNA_7597 0.71 -0.4
649,572 - -0.2
649,578 - -0.2
649,579 + -0.4
649,717 + -0.2
649,730 + 0.9
649,873 + -0.3
649,875 - -0.7
650,023 + -0.3
650,187 + 15966 mRNA_7598 0.12 -0.3
650,308 - 15966 mRNA_7598 0.17 0.4
650,322 - 15966 mRNA_7598 0.17 -0.5
650,341 + 15966 mRNA_7598 0.18 -0.2
650,353 + 15966 mRNA_7598 0.19 -0.4
650,622 + 15966 mRNA_7598 0.30 0.3
650,694 - 15966 mRNA_7598 0.33 0.6
651,326 - 15966 mRNA_7598 0.60 -3.2
651,381 - 15966 mRNA_7598 0.63 -0.8
651,479 + 15966 mRNA_7598 0.67 -0.7
651,612 - 15966 mRNA_7598 0.72 -1.5
651,757 + 15966 mRNA_7598 0.79 -1.0
651,873 - 15966 mRNA_7598 0.84 -1.5
651,910 + 15966 mRNA_7598 0.85 -1.2
651,911 - 15966 mRNA_7598 0.85 0.3
652,050 + 0.8
652,060 + -0.2
652,490 - -0.3