Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7581

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7580: 15948 - KOG1471 Phosphatidylinositol transfer protein SEC14 and related proteins, at 609831 to 611279 15948 mRNA_7581: 15949 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 611690 to 614027 15949 mRNA_7582: 15950 - KOG2534 DNA polymerase IV (family X), at 614883 to 616136 15950

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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611,323 - -0.9
611,326 + 0.3
611,338 + -1.0
611,344 - -0.8
611,346 - 0.5
611,347 + -1.2
611,355 - 0.2
611,355 + 0.4
611,355 + -1.1
611,357 - -1.2
611,363 + 0.3
611,363 + -0.4
611,364 + -0.7
611,498 - -0.3
611,660 + 0.5
611,928 + 15949 mRNA_7581 0.10 0.3
611,955 + 15949 mRNA_7581 0.11 -0.4
612,337 - 15949 mRNA_7581 0.28 0.1
612,546 - 15949 mRNA_7581 0.37 0.0
612,681 + 15949 mRNA_7581 0.42 0.2
612,710 - 15949 mRNA_7581 0.44 -0.4
613,109 - 15949 mRNA_7581 0.61 0.9
613,145 + 15949 mRNA_7581 0.62 0.2
613,449 - 15949 mRNA_7581 0.75 -0.2
613,828 - -0.5
614,145 - -0.5
614,164 + 0.3
614,309 - -0.1
614,575 + 0.7
614,666 + 0.2
614,915 + 0.1