Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7456

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7455: 15823 - KOG1740 Predicted mitochondrial/chloroplast ribosomal protein S17, at 315184 to 315974 15823 mRNA_7456: 15824 - Hypothetical Protein, at 316330 to 316788 15824

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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315,827 + 15823 mRNA_7455 0.81 1.3
315,848 + 15823 mRNA_7455 0.84 -1.6
315,980 + 0.7
316,268 + -0.0
316,398 + 15824 mRNA_7456 0.15 -1.3
316,415 + 15824 mRNA_7456 0.19 -0.6
316,555 + 15824 mRNA_7456 0.49 -1.2
316,560 - 15824 mRNA_7456 0.50 -0.1
316,646 - 15824 mRNA_7456 0.69 -0.2
316,685 - 15824 mRNA_7456 0.77 -0.3
316,686 - 15824 mRNA_7456 0.78 -1.5
316,720 - 15824 mRNA_7456 0.85 -0.5
316,839 - 1.2
316,859 + -1.1
316,867 + -1.7
316,907 + -0.1
316,930 + -0.5
316,937 - 2.6
316,944 + -1.5
316,959 + 1.3
316,976 + -1.1
316,979 - 0.2
316,989 + -0.8
316,989 + 0.1
317,003 + -1.0
317,005 - 0.4
317,074 + -1.3
317,191 - -0.4
317,265 + -0.4
317,286 + -0.4
317,286 - 0.2
317,300 + -0.6
317,383 - -1.9
317,405 - 1.6
317,410 + -1.6
317,410 + 0.8
317,430 + -0.9
317,438 + 0.1
317,455 - 1.7
317,466 - 0.6
317,466 + 1.8
317,491 - 0.3
317,521 - -0.6
317,551 - -0.2
317,571 - 0.2
317,608 - -0.4
317,612 + -1.3
317,612 + 0.2
317,615 - -0.6
317,621 + -0.9
317,621 - 0.0
317,621 - 0.0
317,626 + 0.4
317,627 - 0.7
317,628 + 1.0
317,628 + -0.0
317,631 - -1.4
317,633 + -1.3
317,643 - 1.2
317,649 + -1.7
317,651 + 0.2
317,652 + -0.2
317,661 + 0.1
317,670 - -0.3
317,721 - -0.5