Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7412

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7411: 15779 - K02537 MAD2 mitotic spindle assembly checkpoint protein MAD2, at 216735 to 217924 15779 mRNA_7412: 15780 - K03596 lepA GTP-binding protein LepA, at 218132 to 221123 15780 mRNA_7413: 15781 - K17550 PPP1R7, SDS22 protein phosphatase 1 regulatory subunit 7, at 221244 to 223051 15781

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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217,922 + -1.5
218,534 + 15780 mRNA_7412 0.13 -0.7
218,768 - 15780 mRNA_7412 0.21 -0.7
219,111 + 15780 mRNA_7412 0.33 -0.1
219,126 + 15780 mRNA_7412 0.33 -0.9
219,429 - 15780 mRNA_7412 0.43 -0.7
219,516 - 15780 mRNA_7412 0.46 -0.2
219,719 - 15780 mRNA_7412 0.53 0.1
219,836 + 15780 mRNA_7412 0.57 0.1
219,996 + 15780 mRNA_7412 0.62 0.5
219,998 + 15780 mRNA_7412 0.62 0.2
220,165 + 15780 mRNA_7412 0.68 -0.6
220,593 - 15780 mRNA_7412 0.82 -0.8
220,898 - -0.3
221,163 + -0.1
221,166 - 0.4
221,172 - 1.2