Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7357

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7356: 15724 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 80898 to 81821 15724 mRNA_7357: 15725 - Hypothetical Protein, at 82234 to 84306 15725 mRNA_7358: 15726 - Hypothetical Protein, at 84759 to 87914 15726

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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81,268 - 15724 mRNA_7356 0.40 -1.3
81,277 - 15724 mRNA_7356 0.41 -0.1
81,579 - 15724 mRNA_7356 0.74 -0.3
81,880 - 1.2
81,963 + -0.7
81,979 + -0.8
82,026 + 0.9
82,171 + -0.2
82,315 + 0.4
82,633 + 15725 mRNA_7357 0.19 -1.2
82,795 - 15725 mRNA_7357 0.27 0.2
83,005 - 15725 mRNA_7357 0.37 0.9
83,021 + 15725 mRNA_7357 0.38 -1.2
83,044 + 15725 mRNA_7357 0.39 -0.0
83,167 - 15725 mRNA_7357 0.45 -0.8
83,704 - 15725 mRNA_7357 0.71 -0.1
83,742 - 15725 mRNA_7357 0.73 0.7
83,746 + 15725 mRNA_7357 0.73 -0.1
83,878 + 15725 mRNA_7357 0.79 -2.4
84,034 + 15725 mRNA_7357 0.87 -0.1
84,034 + 15725 mRNA_7357 0.87 -0.2
84,039 + 15725 mRNA_7357 0.87 -0.8
84,135 - -1.3
84,282 + -0.9
84,445 - 1.2
84,460 - -1.3
84,467 + -0.1
84,853 + 0.6
84,856 - -0.9