Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7312

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7311: 15679 - K00940 ndk, NME nucleoside-diphosphate kinase, at 1372652 to 1373595 15679 mRNA_7312: 15680 - HMMPfam-Protein of unknown function (DUF3429)-PF11911, at 1373986 to 1375689 15680 mRNA_7313: 15681 - K00417 QCR7, UQCRB ubiquinol-cytochrome c reductase subunit 7, at 1376085 to 1377067 15681

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,373,578 + -1.8
1,373,751 - 0.8
1,373,891 + -1.5
1,373,899 + -1.2
1,373,900 + 0.8
1,374,122 - -0.0
1,374,234 - 15680 mRNA_7312 0.15 -1.9
1,374,374 - 15680 mRNA_7312 0.23 0.2
1,374,489 + 15680 mRNA_7312 0.30 -0.2
1,374,511 + 15680 mRNA_7312 0.31 -0.5
1,374,832 - 15680 mRNA_7312 0.50 -0.6
1,374,941 + 15680 mRNA_7312 0.56 -0.4
1,374,942 + 15680 mRNA_7312 0.56 0.4
1,375,663 - 0.0
1,375,822 + -1.9
1,376,100 + 2.3