Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7291

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7290: 15658 - HMMPfam-TEA/ATTS domain family-PF01285,ProSiteProfiles-TEA domain profile.-PS51088,SMART-TEA domain-SM00426, at 1307744 to 1309291 15658 mRNA_7291: 15659 - K16803 CKAP5, XMAP215 cytoskeleton-associated protein 5, at 1309556 to 1318572 15659 mRNA_7292: 15660 - SUPERFAMILY--SSF56112, at 1318921 to 1320950 15660

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,308,944 - 15658 mRNA_7290 0.78 -0.0
1,309,093 + 15658 mRNA_7290 0.87 0.8
1,309,260 + 0.8
1,309,346 + 0.3
1,309,418 - -0.7
1,309,423 + 0.2
1,309,428 + 0.2
1,309,460 + -1.2
1,309,702 - 1.7
1,309,851 - -0.4
1,309,860 + -0.6
1,309,947 - -0.4
1,310,130 + -0.2
1,310,160 + 1.0
1,310,311 + 0.0
1,310,500 + 15659 mRNA_7291 0.10 0.3
1,311,124 + 15659 mRNA_7291 0.17 -1.7
1,311,825 - 15659 mRNA_7291 0.25 0.1
1,312,453 - 15659 mRNA_7291 0.32 -0.3
1,312,601 - 15659 mRNA_7291 0.34 -0.4
1,312,601 + 15659 mRNA_7291 0.34 -0.9
1,313,172 - 15659 mRNA_7291 0.40 -0.4
1,317,071 - 15659 mRNA_7291 0.83 0.9
1,317,081 - 15659 mRNA_7291 0.83 -0.1
1,317,126 - 15659 mRNA_7291 0.84 0.4
1,317,187 - 15659 mRNA_7291 0.85 0.3
1,317,221 + 15659 mRNA_7291 0.85 -2.2
1,317,245 + 15659 mRNA_7291 0.85 1.1
1,317,349 + 15659 mRNA_7291 0.86 0.0
1,317,353 - 15659 mRNA_7291 0.86 -0.8
1,317,668 + 15659 mRNA_7291 0.90 -2.7
1,317,674 + -0.8
1,317,912 - -1.4
1,318,197 - -1.0
1,318,204 - -1.1
1,318,323 + 1.4
1,318,355 + 0.3
1,318,631 - -0.3
1,318,640 - 0.4
1,318,785 - 0.7
1,318,794 + -0.5
1,318,803 - -0.9
1,318,942 + 1.7
1,319,053 + -0.3
1,319,080 - -1.3
1,319,106 - 0.1
1,319,321 - 15660 mRNA_7292 0.20 0.6
1,319,365 + 15660 mRNA_7292 0.22 0.8
1,319,514 + 15660 mRNA_7292 0.29 -0.4