Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7271

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7270: 15638 - ProSiteProfiles-TEA domain profile.-PS51088, at 1266504 to 1267966 15638 mRNA_7271: 15639 - HMMPfam-TEA/ATTS domain family-PF01285,ProSiteProfiles-TEA domain profile.-PS51088, at 1268325 to 1269363 15639

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,267,745 - 15638 mRNA_7270 0.85 0.1
1,267,758 + 15638 mRNA_7270 0.86 0.6
1,267,767 - 15638 mRNA_7270 0.86 -0.5
1,267,860 - -0.7
1,267,879 - 0.7
1,267,890 - 0.6
1,267,906 - 0.8
1,268,038 - 1.7
1,268,039 + 2.0
1,268,181 + 0.7
1,268,181 + -1.4
1,268,181 + -0.4
1,268,201 - -0.6
1,268,231 - 0.3
1,268,348 - -2.7
1,268,351 + -0.3
1,268,355 + -0.3
1,268,365 + -1.8
1,268,369 - -0.0
1,268,462 + 15639 mRNA_7271 0.13 -1.1
1,268,542 + 15639 mRNA_7271 0.21 -0.7
1,268,587 - 15639 mRNA_7271 0.25 0.4
1,268,693 + 15639 mRNA_7271 0.35 -0.2
1,268,723 - 15639 mRNA_7271 0.38 -0.3
1,268,769 - 15639 mRNA_7271 0.43 -1.5
1,268,771 + 15639 mRNA_7271 0.43 0.2
1,268,893 + 15639 mRNA_7271 0.55 0.3
1,268,895 - 15639 mRNA_7271 0.55 -0.1
1,268,896 + 15639 mRNA_7271 0.55 -0.4
1,268,896 + 15639 mRNA_7271 0.55 0.3
1,268,914 + 15639 mRNA_7271 0.57 0.1
1,268,917 - 15639 mRNA_7271 0.57 0.4
1,268,921 + 15639 mRNA_7271 0.57 1.9
1,268,931 + 15639 mRNA_7271 0.58 -0.3
1,268,958 - 15639 mRNA_7271 0.61 0.4
1,268,965 + 15639 mRNA_7271 0.62 -0.3
1,268,967 - 15639 mRNA_7271 0.62 0.1
1,268,968 - 15639 mRNA_7271 0.62 -1.2
1,268,985 + 15639 mRNA_7271 0.64 -0.4
1,269,071 - 15639 mRNA_7271 0.72 -0.2
1,269,072 - 15639 mRNA_7271 0.72 0.4
1,269,122 - 15639 mRNA_7271 0.77 -1.1
1,269,184 - 15639 mRNA_7271 0.83 -0.4
1,269,222 + 15639 mRNA_7271 0.86 0.0
1,269,266 + 0.8
1,269,325 + -0.9
1,269,420 + -1.8
1,269,657 - -0.8
1,269,678 + 0.5
1,269,690 + 0.3
1,269,777 + -0.8
1,269,905 - 0.1
1,269,982 + -0.5
1,269,982 + -0.1
1,269,984 - -0.5
1,270,101 + 0.9
1,270,227 - -0.7