Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7127

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7126: 15494 - K15122 SLC41A solute carrier family 41, at 939569 to 941230 15494 mRNA_7127: 15495 - BLAST adenylate cyclase-associated protein [Moesziomyces an..., at 941404 to 943862 15495 mRNA_7128: 15496 - K00939 adk, AK adenylate kinase, at 944172 to 945488 15496

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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940,741 - 15494 mRNA_7126 0.71 0.5
940,877 - 15494 mRNA_7126 0.79 0.6
940,891 - 15494 mRNA_7126 0.80 0.1
941,014 - 15494 mRNA_7126 0.87 0.1
941,309 - 0.1
941,327 + -0.3
941,328 + -0.2
941,332 - -0.2
941,460 + 1.1
941,460 + -0.7
941,590 + 1.1
941,595 - 0.1
941,602 - -0.5
941,603 + -2.0
941,612 + -1.6
941,729 - 15495 mRNA_7127 0.13 -0.3
941,736 + 15495 mRNA_7127 0.14 -0.6
941,766 - 15495 mRNA_7127 0.15 -1.2
941,772 + 15495 mRNA_7127 0.15 -1.0
941,775 + 15495 mRNA_7127 0.15 -0.5
942,035 + 15495 mRNA_7127 0.26 -0.8
942,049 - 15495 mRNA_7127 0.26 -0.5
942,105 - 15495 mRNA_7127 0.29 -0.7
942,179 - 15495 mRNA_7127 0.32 -0.1
942,187 - 15495 mRNA_7127 0.32 -0.2
942,660 - 15495 mRNA_7127 0.51 -0.5
942,932 - 15495 mRNA_7127 0.62 -1.5
943,045 - 15495 mRNA_7127 0.67 -0.4
943,518 - 15495 mRNA_7127 0.86 -0.3
944,148 + -1.0