Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7069

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7068: 15436 - K00167 BCKDHB, bkdA2 2-oxoisovalerate dehydrogenase E1 component beta subunit, at 804244 to 806337 15436 mRNA_7069: 15437 - HMMPfam-DNA-directed RNA polymerase III subunit Rpc31-PF11705, at 806497 to 812015 15437 mRNA_7070: 15438 - K13953 adhP alcohol dehydrogenase, propanol-preferring, at 812673 to 814209 15438

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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805,533 - 15436 mRNA_7068 0.62 0.8
805,636 + 15436 mRNA_7068 0.66 0.3
805,952 - 15436 mRNA_7068 0.82 0.0
806,083 - 15436 mRNA_7068 0.88 0.5
806,100 + 15436 mRNA_7068 0.89 0.4
806,227 - 1.6
806,526 + -1.5
806,680 - -0.4
806,892 - 1.4
806,996 - -0.5
807,111 - 15437 mRNA_7069 0.11 0.6
807,155 - 15437 mRNA_7069 0.12 -0.8
807,402 + 15437 mRNA_7069 0.16 0.6
807,600 - 15437 mRNA_7069 0.20 0.8
807,601 + 15437 mRNA_7069 0.20 0.3
807,601 + 15437 mRNA_7069 0.20 1.0
807,610 + 15437 mRNA_7069 0.20 -1.0
807,879 - 15437 mRNA_7069 0.25 -0.8
808,173 + 15437 mRNA_7069 0.30 -0.5
808,530 + 15437 mRNA_7069 0.37 -0.1
808,533 - 15437 mRNA_7069 0.37 -0.8
808,540 + 15437 mRNA_7069 0.37 -0.1
808,579 + 15437 mRNA_7069 0.38 1.2
808,674 + 15437 mRNA_7069 0.39 -0.4
808,741 + 15437 mRNA_7069 0.41 -0.1
808,858 + 15437 mRNA_7069 0.43 -0.2
808,990 - 15437 mRNA_7069 0.45 -0.6
809,186 - 15437 mRNA_7069 0.49 0.6
809,361 - 15437 mRNA_7069 0.52 -0.5
809,747 - 15437 mRNA_7069 0.59 0.5
809,789 + 15437 mRNA_7069 0.60 0.1
809,796 - 15437 mRNA_7069 0.60 -0.9
809,892 - 15437 mRNA_7069 0.62 -0.0
810,092 - 15437 mRNA_7069 0.65 -0.3
810,389 + 15437 mRNA_7069 0.71 -0.8
810,502 + 15437 mRNA_7069 0.73 0.0
810,639 + 15437 mRNA_7069 0.75 0.5
810,650 - 15437 mRNA_7069 0.75 0.2
810,665 + 15437 mRNA_7069 0.76 -0.1
810,668 + 15437 mRNA_7069 0.76 -0.6
810,766 - 15437 mRNA_7069 0.77 -0.4
810,769 + 15437 mRNA_7069 0.77 -1.1
810,777 + 15437 mRNA_7069 0.78 -0.6
810,787 - 15437 mRNA_7069 0.78 -0.2
810,790 + 15437 mRNA_7069 0.78 -1.3
810,804 - 15437 mRNA_7069 0.78 -0.0
810,808 - 15437 mRNA_7069 0.78 0.4
810,808 + 15437 mRNA_7069 0.78 0.2
811,993 + -0.0
812,128 - -0.4
812,131 + 0.5
812,141 - -1.1
812,150 + 0.5
812,192 - 0.1
812,226 - 0.2
812,226 - 0.5
812,248 + 0.6
812,253 + 0.2
812,254 + -1.2
812,258 - 0.0
812,261 + -3.2
812,281 + -0.0
812,286 - 1.1
812,294 - -0.7
812,318 - -0.1
812,323 - -0.1
812,324 + -0.5
812,339 - -0.0
812,377 - 0.4
812,402 + 0.2
812,405 - -0.1
812,406 - -0.5
812,415 + -0.2
812,416 - 0.3
812,416 + 0.4
812,424 - -1.0
812,424 + -0.2
812,426 - -0.3
812,449 - -0.2
812,463 - -0.9
812,466 + -0.0
812,469 + 0.6
812,485 - -0.6
812,489 + 0.9
812,490 + -1.7
812,608 - -0.1
812,612 - 0.6
812,628 + -0.5
812,779 + -0.5