Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7062

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7061: 15429 - K01077 E3.1.3.1, phoA, phoB alkaline phosphatase, at 789472 to 792234 15429 mRNA_7062: 15430 - HMMPfam-N-acetyltransferase-PF00797,SUPERFAMILY--SSF54001, at 792528 to 793710 15430 mRNA_7063: 15431 - Hypothetical Protein, at 793722 to 794198 15431

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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791,699 - 15429 mRNA_7061 0.81 -1.8
791,728 - 15429 mRNA_7061 0.82 -0.7
791,906 - 15429 mRNA_7061 0.88 -0.1
792,025 + 0.5
792,155 - -0.3
792,179 + -0.3
792,331 + -0.5
792,333 - -1.7
792,340 - -0.0
792,344 - 0.9
792,349 + -0.8
792,507 + 0.4
792,630 - 0.8
792,634 + -0.2
792,941 - 15430 mRNA_7062 0.35 -0.6
792,957 + 15430 mRNA_7062 0.36 -0.7
793,128 + 15430 mRNA_7062 0.51 -0.0
793,221 - 15430 mRNA_7062 0.59 0.1
793,683 + -0.2
793,693 + 0.1
793,714 - -0.3
793,873 + 15431 mRNA_7063 0.32 -0.2
793,966 + 15431 mRNA_7063 0.51 0.0
794,433 - -0.1
794,435 + -0.1
794,582 + -0.1