Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7019

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7018: 15386 - Hypothetical Protein, at 684817 to 685871 15386 mRNA_7019: 15387 - K13212 LUC7L2 RNA-binding protein Luc7-like 2, at 686088 to 688034 15387 mRNA_7020: 15388 - K11446 KDM5, JARID1 histone demethylase JARID1, at 688229 to 691595 15388

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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685,457 + 15386 mRNA_7018 0.61 1.0
685,607 - 15386 mRNA_7018 0.75 -0.1
685,742 - 15386 mRNA_7018 0.88 -1.3
685,752 + 15386 mRNA_7018 0.89 0.1
685,754 + 15386 mRNA_7018 0.89 0.8
685,866 - 2.3
686,054 + 0.3
686,061 + 2.0
687,471 - 15387 mRNA_7019 0.71 0.2
687,486 - 15387 mRNA_7019 0.72 -0.6
688,080 + -1.3
688,203 - -0.1
688,220 + -0.0
688,493 - -2.1
688,667 + 15388 mRNA_7020 0.13 0.2
688,806 - 15388 mRNA_7020 0.17 -1.9