Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6989

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6988: 15356 - K00485 FMO dimethylaniline monooxygenase (N-oxide forming), at 609889 to 611754 15356 mRNA_6989: 15357 - K11836 USP5_13, UBP14 ubiquitin carboxyl-terminal hydrolase 5/13, at 611825 to 615054 15357 mRNA_6990: 15358 - K09001 anmK anhydro-N-acetylmuramic acid kinase, at 615563 to 617347 15358

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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610,863 + 15356 mRNA_6988 0.52 -0.0
610,886 + 15356 mRNA_6988 0.53 -1.0
611,440 - 15356 mRNA_6988 0.83 -0.6
611,583 + -0.2
611,759 - -0.7
612,011 - -0.9
612,030 - -1.0
612,034 + 0.0
612,644 - 15357 mRNA_6989 0.25 -1.2
613,187 - 15357 mRNA_6989 0.42 1.8
613,348 + 15357 mRNA_6989 0.47 0.1
613,519 + 15357 mRNA_6989 0.52 0.7
613,943 + 15357 mRNA_6989 0.66 1.3
614,099 - 15357 mRNA_6989 0.70 0.2
614,997 + -0.1
615,102 + -1.1
615,445 - -2.7
615,562 - -1.6
615,655 + 0.2
615,807 - 15358 mRNA_6990 0.14 1.0
615,961 - 15358 mRNA_6990 0.22 -0.5
615,975 + 15358 mRNA_6990 0.23 -0.3